AJC46408.1 protein (Xanthomonas sacchari) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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gene fusions

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[Homology]

Score

AJC46408.1

Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology. (794 aa)

Predicted Functional Partners:

AJC45114.1

0.732

AJC46495.1

0.669

AJC47114.1

0.666

AJC46042.1

0.628

AJC47390.1

0.622

AJC46850.1

0.598

AJC46851.1

0.593

AJC47174.1

0.541

AJC46048.1

0.528

AJC46050.1

0.518

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC45114.1	AJC46408.1	SB85_04450	SB85_12205	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
AJC45114.1	AJC46495.1	SB85_04450	SB85_12705	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
AJC45114.1	AJC46850.1	SB85_04450	SB85_15025	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
AJC45114.1	AJC46851.1	SB85_04450	SB85_15030	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.559
AJC45114.1	AJC47174.1	SB85_04450	SB85_16920	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.443
AJC45114.1	AJC47390.1	SB85_04450	SB85_18130	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.486
AJC46042.1	AJC46048.1	SB85_09905	SB85_09945	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
AJC46042.1	AJC46050.1	SB85_09905	SB85_09960	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.867
AJC46042.1	AJC46408.1	SB85_09905	SB85_12205	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.628
AJC46042.1	AJC46851.1	SB85_09905	SB85_15030	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.690
AJC46042.1	AJC47114.1	SB85_09905	SB85_16565	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
AJC46048.1	AJC46042.1	SB85_09945	SB85_09905	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.801
AJC46048.1	AJC46408.1	SB85_09945	SB85_12205	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
AJC46048.1	AJC46851.1	SB85_09945	SB85_15030	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.596
AJC46050.1	AJC46042.1	SB85_09960	SB85_09905	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.867
AJC46050.1	AJC46408.1	SB85_09960	SB85_12205	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.518
AJC46050.1	AJC46851.1	SB85_09960	SB85_15030	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.564
AJC46408.1	AJC45114.1	SB85_12205	SB85_04450	Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
AJC46408.1	AJC46042.1	SB85_12205	SB85_09905	Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.628
AJC46408.1	AJC46048.1	SB85_12205	SB85_09945	Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528