AJC46452.1 protein (Xanthomonas sacchari) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJC46452.1

LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)

Predicted Functional Partners:

AJC46461.1

0.889

AJC44708.1

0.822

AJC45073.1

0.811

AJC46511.1

0.803

AJC45570.1

0.802

AJC47600.1

0.779

AJC47607.1

0.777

AJC47221.1

0.698

AJC45821.1

0.694

AJC44686.1

0.539

Your Current Organism:

Xanthomonas sacchari

NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJC44686.1	AJC44708.1	SB85_01815	SB85_01950	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
AJC44686.1	AJC45073.1	SB85_01815	SB85_04115	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
AJC44686.1	AJC45570.1	SB85_01815	SB85_07090	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.743
AJC44686.1	AJC45821.1	SB85_01815	SB85_08585	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
AJC44686.1	AJC46452.1	SB85_01815	SB85_12450	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.539
AJC44686.1	AJC46461.1	SB85_01815	SB85_12505	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AJC44686.1	AJC46511.1	SB85_01815	SB85_12810	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AJC44686.1	AJC47600.1	SB85_01815	SB85_11095	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
AJC44686.1	AJC47607.1	SB85_01815	SB85_11325	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.720
AJC44708.1	AJC44686.1	SB85_01950	SB85_01815	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
AJC44708.1	AJC45821.1	SB85_01950	SB85_08585	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.839
AJC44708.1	AJC46452.1	SB85_01950	SB85_12450	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.822
AJC44708.1	AJC46461.1	SB85_01950	SB85_12505	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.890
AJC44708.1	AJC47600.1	SB85_01950	SB85_11095	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
AJC45073.1	AJC44686.1	SB85_04115	SB85_01815	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
AJC45073.1	AJC45821.1	SB85_04115	SB85_08585	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
AJC45073.1	AJC46452.1	SB85_04115	SB85_12450	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.811
AJC45073.1	AJC46461.1	SB85_04115	SB85_12505	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
AJC45570.1	AJC44686.1	SB85_07090	SB85_01815	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.743
AJC45570.1	AJC45821.1	SB85_07090	SB85_08585	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.786