STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC46486.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)    
Predicted Functional Partners:
AJC46743.1
Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
    0.761
AJC45568.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
AJC44901.1
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.750
AJC44905.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
AJC47566.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.739
AJC46633.1
Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.708
AJC45654.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.683
AJC46851.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
AJC46465.1
Calcium-dependent protein kinase 21; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
AJC47230.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.672
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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