Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC47652.1Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology. (1525 aa)    
Predicted Functional Partners:
AJC46573.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
AJC45693.1
peptidyl-Asp metalloendopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.721
AJC47464.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
AJC46903.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
AJC45278.1
Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.636
AJC46575.1
Tail collar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.632
AJC46576.1
Microcystin-dependent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.622
AJC46196.1
Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.617
AJC47598.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.613
AJC45622.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.610
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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