Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC47672.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (52 aa)    
Predicted Functional Partners:
AJC46282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
 
    0.925
AJC47156.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.918
AJC45614.1
Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.641
AJC46662.1
3-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.604
AJC45809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.563
AJC46389.1
SH3 domain-containing-like protein 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.503
AJC46663.1
Sterol-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.420
AJC46661.1
Peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.419
AJC46664.1
Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.
       0.419
AJC46665.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.406
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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