STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC46687.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)    
Predicted Functional Partners:
AJC45294.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.751
AJC45423.1
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.751
AJC45685.1
Peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
   
 
 0.751
AJC45776.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.751
AJC45882.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.751
AJC46485.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.751
AJC46486.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.751
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
  
 0.527
AJC47118.1
MoxJ protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.489
AJC47270.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.460
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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