Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC47687.1Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)    
Predicted Functional Partners:
AJC45400.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.719
AJC44930.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.690
AJC46794.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.531
folE2
GTP cyclohydrolase; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
  
 0.462
AJC46324.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.440
AJC46795.1
3-dehydroshikimate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.428
AJC46796.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.428
AJC46790.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.420
AJC46791.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.420
AJC46792.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.420
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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