Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJC46964.1Peptidase M4; Extracellular zinc metalloprotease. (523 aa)    
Predicted Functional Partners:
AJC47425.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.575
AJC47580.1
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.566
AJC45791.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
  
 0.531
AJC46124.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
rseP
Zinc metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.515
AJC45693.1
peptidyl-Asp metalloendopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.503
AJC45373.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.502
AJC44492.1
RebB like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
AJC46123.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
AJC44494.1
R body protein RebB-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.