Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJC47201.1Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)    
Predicted Functional Partners:
AJC47203.1
Methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).
 
     0.612
grxD-2
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.603
AJC46352.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.571
AJC47624.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.548
AJC46354.1
Acyl carrier protein; Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.536
AJC47635.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.528
AJC46350.1
Fatty acyl CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.523
AJC46349.1
Phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.521
AJC46355.1
Hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.503
AJC46346.1
Halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.495
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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