Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJC47216.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)    
Predicted Functional Partners:
AJC47215.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.994
AJC47214.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.838
AJC47501.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.726
AJC47213.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.557
AJC47241.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.525
AJC46424.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.502
AJC46797.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.502
AJC47029.1
N-acylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.502
AJC47056.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.502
potG
Putrescine transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  
 0.441
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.