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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC47335.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)    
Predicted Functional Partners:
AJC47333.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.784
AJC47334.1
Biotin transporter BioY; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.784
AJC47332.1
acetyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.495
tolQ
Colicin transporter; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.485
AJC46488.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.485
AJC47300.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.485
tolR
Biopolymer transporter TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.484
AJC46489.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.484
AJC46490.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.484
AJC46491.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.484
Your Current Organism:
Xanthomonas sacchari
NCBI taxonomy Id: 56458
Other names: CFBP 4641, ICMP 16916, LMG 471, LMG:471, X. sacchari
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