STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGR62114.1Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)    
Predicted Functional Partners:
KGR62113.1
Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.854
KGR62111.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.839
ssaR
Type III secretion system protein SsaR; Part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.813
KGR62109.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.802
KGR62112.1
4-hydroxyphenylacetate catabolism regulator HpaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.765
KGR62107.1
Hypersensitivity response secretion protein hrcV; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.759
KGR62115.1
4-hydroxyphenylacetate 3-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.717
KGR62106.1
Type III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.677
KGR62108.1
Type III secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.624
KGR62105.1
Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.608
Your Current Organism:
Xanthomonas vasicola
NCBI taxonomy Id: 56459
Other names: CFBP 2543, ICMP 3103, LMG 736, LMG:736, NCPPB 2417, X. vasicola, Xanthomonas campestris pv. holcicola, Xanthomonas holcicola, Xanthomonas vasicola pv. holcicola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.