STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloBHydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (255 aa)    
Predicted Functional Partners:
gloA
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
 
  
 0.958
KGR60728.1
Dimethylmenaquinone methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.902
KGR59081.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.900
KGR61177.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.848
dnaQ
DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.
     
 0.689
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
     
 0.671
KGR61179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.654
grxD-2
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.631
gorA
Glutathione reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.576
grxD
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily.
  
   
 0.530
Your Current Organism:
Xanthomonas vasicola
NCBI taxonomy Id: 56459
Other names: CFBP 2543, ICMP 3103, LMG 736, LMG:736, NCPPB 2417, X. vasicola, Xanthomonas campestris pv. holcicola, Xanthomonas holcicola, Xanthomonas vasicola pv. holcicola
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.