STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGR58699.1SulP family inorganic anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (522 aa)    
Predicted Functional Partners:
KGR58698.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 0.990
KGR60053.1
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.902
KGR61026.1
NADH:ubiquinone oxidoreductase subunit M; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.885
KGR58723.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
  
 0.815
KGR61415.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.711
KGR59358.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.711
KGR59244.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.711
KGR56420.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.711
groEL
Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
     
 0.683
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.612
Your Current Organism:
Xanthomonas vasicola
NCBI taxonomy Id: 56459
Other names: CFBP 2543, ICMP 3103, LMG 736, LMG:736, NCPPB 2417, X. vasicola, Xanthomonas campestris pv. holcicola, Xanthomonas holcicola, Xanthomonas vasicola pv. holcicola
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