STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1MH45_MICPCPredicted protein. (803 aa)    
Predicted Functional Partners:
C1MIF1_MICPC
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
  
 0.999
C1MJ87_MICPC
Predicted protein.
   
 0.999
TFB4
RNA polymerase II transcription factor B subunit 4.
    
 0.999
C1N136_MICPC
Predicted protein.
    
 0.999
C1N257_MICPC
Predicted protein.
   
 0.999
C1N2T6_MICPC
General transcription factor IIH subunit.
    
 0.999
C1MH67_MICPC
Predicted protein.
    
 0.998
C1MXV4_MICPC
Predicted protein.
    
 0.998
C1MZY4_MICPC
Transcription initiation factor.
    
 0.998
CYCH
Predicted protein; Belongs to the cyclin family.
    
 0.998
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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