STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1MHI7_MICPCPredicted protein. (142 aa)    
Predicted Functional Partners:
C1N4X4_MICPC
Autophagy-related protein.
   
 0.931
C1N2W9_MICPC
Predicted protein.
   
 0.880
C1MSH9_MICPC
Predicted protein.
    
 0.784
C1N9D9_MICPC
Autophagy protein 5; Required for autophagy.
    
 0.749
C1MSX9_MICPC
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
     
 0.723
C1MMJ7_MICPC
Peroxisomal protein importer family.
    
 0.703
C1MKB0_MICPC
Predicted protein.
    
 0.659
C1N0N2_MICPC
Predicted protein.
    
 0.659
C1N0H9_MICPC
Predicted protein.
     
 0.652
C1N944_MICPC
Predicted protein.
   
 0.643
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.