STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1MIR3_MICPCABC transporter/cobalt transport family protein. (757 aa)    
Predicted Functional Partners:
C1MQ23_MICPC
Predicted protein; Belongs to the universal ribosomal protein uS3 family.
   
   0.522
C1ML12_MICPC
Predicted protein.
   
   0.520
C1MPK4_MICPC
Predicted protein.
   
   0.520
C1MJ33_MICPC
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.516
C1MWW1_MICPC
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.507
C1MRV4_MICPC
Predicted protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.501
C1MH03_MICPC
Predicted protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.489
C1MT75_MICPC
Predicted protein.
   
   0.485
C1MVY0_MICPC
Predicted protein.
   
 0.484
DHFR-TS
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.481
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.