C1MJR6_MICPC protein (Micromonas pusilla) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

C1MJR6_MICPC

Predicted protein. (906 aa)

Predicted Functional Partners:

C1MQG3_MICPC

0.561

C1MW81_MICPC

0.535

C1MJN3_MICPC

0.516

C1N7A0_MICPC

0.512

C1N737_MICPC

0.507

C1MNP4_MICPC

0.503

SNRPD2

0.499

C1MPZ8_MICPC

0.492

C1NAD2_MICPC

0.484

C1MVH0_MICPC

0.483

Your Current Organism:

Micromonas pusilla

NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1MJN3_MICPC	C1MJR6_MICPC	C1MJN3	C1MJR6	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Predicted protein.	0.516
C1MJN3_MICPC	C1MNP4_MICPC	C1MJN3	C1MNP4	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Predicted protein.	0.999
C1MJN3_MICPC	C1MPZ8_MICPC	C1MJN3	C1MPZ8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999
C1MJN3_MICPC	C1MW81_MICPC	C1MJN3	C1MW81	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Predicted protein.	0.994
C1MJN3_MICPC	C1N737_MICPC	C1MJN3	C1N737	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Predicted protein.	0.999
C1MJN3_MICPC	C1N7A0_MICPC	C1MJN3	C1N7A0	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
C1MJN3_MICPC	SNRPD2	C1MJN3	C1ML77	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D2.	0.999
C1MJR6_MICPC	C1MJN3_MICPC	C1MJR6	C1MJN3	Predicted protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.516
C1MJR6_MICPC	C1MNP4_MICPC	C1MJR6	C1MNP4	Predicted protein.	Predicted protein.	0.503
C1MJR6_MICPC	C1MPZ8_MICPC	C1MJR6	C1MPZ8	Predicted protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.492
C1MJR6_MICPC	C1MQG3_MICPC	C1MJR6	C1MQG3	Predicted protein.	Predicted protein.	0.561
C1MJR6_MICPC	C1MVH0_MICPC	C1MJR6	C1MVH0	Predicted protein.	Predicted protein.	0.483
C1MJR6_MICPC	C1MW81_MICPC	C1MJR6	C1MW81	Predicted protein.	Predicted protein.	0.535
C1MJR6_MICPC	C1N737_MICPC	C1MJR6	C1N737	Predicted protein.	Predicted protein.	0.507
C1MJR6_MICPC	C1N7A0_MICPC	C1MJR6	C1N7A0	Predicted protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.512
C1MJR6_MICPC	C1NAD2_MICPC	C1MJR6	C1NAD2	Predicted protein.	Predicted protein.	0.484
C1MJR6_MICPC	SNRPD2	C1MJR6	C1ML77	Predicted protein.	Small nuclear ribonucleoprotein Sm D2.	0.499
C1MNP4_MICPC	C1MJN3_MICPC	C1MNP4	C1MJN3	Predicted protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
C1MNP4_MICPC	C1MJR6_MICPC	C1MNP4	C1MJR6	Predicted protein.	Predicted protein.	0.503
C1MNP4_MICPC	C1MPZ8_MICPC	C1MNP4	C1MPZ8	Predicted protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.999