STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1MNE3_MICPCPredicted protein. (730 aa)    
Predicted Functional Partners:
C1N399_MICPC
Predicted protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.990
C1N610_MICPC
Predicted protein.
    
 0.989
C1MPP2_MICPC
Predicted protein.
   
 
 0.977
C1MRM2_MICPC
Predicted protein.
    
 
 0.888
C1MQ00_MICPC
Predicted protein.
    
 
 0.859
C1MX01_MICPC
Predicted protein.
    
 
 0.859
C1MHF7_MICPC
Syntaxin related protein, t_SNARE; Belongs to the syntaxin family.
    
 
 0.857
C1MT77_MICPC
Predicted protein.
    
 
 0.857
C1MV01_MICPC
Predicted protein.
    
 
 0.806
C1NA55_MICPC
Predicted protein; Belongs to the syntaxin family.
    
 
 0.806
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.