STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD51BRad51 DNA recombinase 2. (437 aa)    
Predicted Functional Partners:
C1N185_MICPC
Predicted protein.
   
 0.997
C1N4S4_MICPC
ATP-dependent DNA helicase.
   
 0.997
XRCC2
XRCC2 DNA recombinase.
   
 0.908
C1N0K9_MICPC
Predicted protein.
   
 0.885
RAD51C
Rad51 DNA recombinase 3.
  
0.863
DMC1
DMC1 DNA recombinase; Belongs to the RecA family.
  
0.806
C1MYC1_MICPC
Predicted protein.
  
 0.794
C1MHR2_MICPC
Predicted protein.
  
 0.785
Mus81
Ercc4-like protein.
   
 0.781
C1MPH3_MICPC
Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.
  
 0.760
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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