Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C1MHR2_MICPC | C1MPH3_MICPC | C1MHR2 | C1MPH3 | Predicted protein. | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | 0.775 |
C1MHR2_MICPC | C1MYC1_MICPC | C1MHR2 | C1MYC1 | Predicted protein. | Predicted protein. | 0.933 |
C1MHR2_MICPC | C1N0K9_MICPC | C1MHR2 | C1N0K9 | Predicted protein. | Predicted protein. | 0.840 |
C1MHR2_MICPC | C1N185_MICPC | C1MHR2 | C1N185 | Predicted protein. | Predicted protein. | 0.999 |
C1MHR2_MICPC | C1N4S4_MICPC | C1MHR2 | C1N4S4 | Predicted protein. | ATP-dependent DNA helicase. | 0.999 |
C1MHR2_MICPC | DMC1 | C1MHR2 | C1N0Y2 | Predicted protein. | DMC1 DNA recombinase; Belongs to the RecA family. | 0.780 |
C1MHR2_MICPC | Mus81 | C1MHR2 | C1MGP8 | Predicted protein. | Ercc4-like protein. | 0.886 |
C1MHR2_MICPC | RAD51B | C1MHR2 | C1MP21 | Predicted protein. | Rad51 DNA recombinase 2. | 0.785 |
C1MHR2_MICPC | RAD51C | C1MHR2 | C1MGU0 | Predicted protein. | Rad51 DNA recombinase 3. | 0.780 |
C1MHR2_MICPC | XRCC2 | C1MHR2 | C1N998 | Predicted protein. | XRCC2 DNA recombinase. | 0.743 |
C1MPH3_MICPC | C1MHR2_MICPC | C1MPH3 | C1MHR2 | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | Predicted protein. | 0.775 |
C1MPH3_MICPC | C1MYC1_MICPC | C1MPH3 | C1MYC1 | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | Predicted protein. | 0.676 |
C1MPH3_MICPC | C1N0K9_MICPC | C1MPH3 | C1N0K9 | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | Predicted protein. | 0.492 |
C1MPH3_MICPC | C1N185_MICPC | C1MPH3 | C1N185 | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | Predicted protein. | 0.999 |
C1MPH3_MICPC | C1N4S4_MICPC | C1MPH3 | C1N4S4 | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | ATP-dependent DNA helicase. | 0.999 |
C1MPH3_MICPC | DMC1 | C1MPH3 | C1N0Y2 | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | DMC1 DNA recombinase; Belongs to the RecA family. | 0.676 |
C1MPH3_MICPC | Mus81 | C1MPH3 | C1MGP8 | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | Ercc4-like protein. | 0.790 |
C1MPH3_MICPC | RAD51B | C1MPH3 | C1MP21 | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | Rad51 DNA recombinase 2. | 0.760 |
C1MPH3_MICPC | RAD51C | C1MPH3 | C1MGU0 | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | Rad51 DNA recombinase 3. | 0.676 |
C1MPH3_MICPC | XRCC2 | C1MPH3 | C1N998 | Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. | XRCC2 DNA recombinase. | 0.503 |
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