STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1MR48_MICPCPeptidylprolyl isomerase. (191 aa)    
Predicted Functional Partners:
C1MKP7_MICPC
Predicted protein.
   
   0.572
C1MP84_MICPC
Predicted protein.
   
   0.571
NOP5
Nucleolar RNA binding protein.
   
   0.528
C1MN60_MICPC
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.519
C1MSI1_MICPC
Predicted protein.
   
   0.473
C1MSY3_MICPC
Predicted protein.
   
  0.465
C1N7A3_MICPC
Predicted protein.
   
 0.454
C1N4M8_MICPC
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
   0.445
C1MIQ7_MICPC
Predicted protein.
   
   0.436
C1MH61_MICPC
Predicted protein.
   
   0.432
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.