STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1MSH9_MICPCPredicted protein. (98 aa)    
Predicted Functional Partners:
C1MGR0_MICPC
Predicted protein.
  
 0.999
C1MGT2_MICPC
Predicted protein; Belongs to the universal ribosomal protein uL5 family.
   
 0.999
C1MH03_MICPC
Predicted protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.999
C1MHL0_MICPC
Predicted protein.
   
 0.999
C1MIC2_MICPC
Predicted protein.
   
 0.999
C1MJ16_MICPC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.999
C1MJ33_MICPC
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.999
C1MKB0_MICPC
Predicted protein.
    
  0.999
RPL19
60S ribosomal protein L19 protein.
   
 0.999
RPS28E
Ribosomal protein S28e.
   
 0.999
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.