STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1MUK9_MICPCPredicted protein. (939 aa)    
Predicted Functional Partners:
C1MGG8_MICPC
ARID/BRIGHT DNA binding domain protein.
    
 0.725
C1MXY3_MICPC
RuvB-like helicase; Belongs to the RuvB family.
    
 0.621
C1MXP5_MICPC
Actin superfamily; Belongs to the actin family.
   
 0.611
C1N8K5_MICPC
SNF2 super family.
  
 
 0.593
C1MGI5_MICPC
Predicted protein.
    
 0.571
RAD54
SNF2 super family.
  
 
 0.566
C1MZB5_MICPC
SNF2 super family.
  
 
 0.566
C1MS63_MICPC
Predicted protein.
  
 
 0.563
C1MUU2_MICPC
Predicted protein.
  
 
 0.559
RAD54B
SNF2 super family.
  
 
 0.555
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.