STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1MUR6_MICPCPredicted protein. (305 aa)    
Predicted Functional Partners:
C1MYJ2_MICPC
Predicted protein.
   
 0.999
C1MVD4_MICPC
Predicted protein; Belongs to the synaptobrevin family.
   
 0.998
C1MWT4_MICPC
Predicted protein.
    
 0.998
C1MYN4_MICPC
Predicted protein.
   
 0.996
C1MWD4_MICPC
Predicted protein.
    
 0.986
C1N8P2_MICPC
Predicted protein.
    
 0.978
C1N598_MICPC
Predicted protein.
    
 0.975
BCOP
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
     
 0.938
C1N2H0_MICPC
Predicted protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.933
C1MPT9_MICPC
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
     
 0.930
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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