STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODA-LC7BDynein light chain roadblock. (109 aa)    
Predicted Functional Partners:
ODA-LC8
Dynein light chain.
   
 0.983
C1N7T1_MICPC
Dynein light chain.
   
 0.983
ODA-LC7
Dynein light chain roadblock.
  
 
 
0.980
ODA-LC2
Flagellar outer dynein arm light chain 2.
  
 0.930
ODA-IC1
Flagellar outer dynein arm intermediate chain 1.
    
 0.897
C1MLR2_MICPC
Flagellar inner arm intermediate chain.
    
 0.897
D1BLIC
Cytoplasmic dynein 2 light intermediate chain 1.
    
 0.897
ODA-LC6.2
Dynein light chain.
   
 0.885
ODA-DHCB
Flagellar outer dynein arm heavy chain beta.
  
 
 0.873
ODA-IC2
Flagellar outer dynein arm intermediate chain 2.
    
 0.866
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.