STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1MVX8_MICPCType II secretory pathway family protein. (740 aa)    
Predicted Functional Partners:
C1MHM7_MICPC
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
  
 0.999
C1MJG8_MICPC
Type II secretory pathway family protein.
    
 0.999
C1MXR4_MICPC
Type II secretory pathway family protein.
    
 0.999
C1NA30_MICPC
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.969
C1MLE1_MICPC
Type II secretory pathway family protein.
   
 0.961
C1MW67_MICPC
Type II secretory pathway family protein.
   
 0.941
C1MZD5_MICPC
Type II secretory pathway family protein.
   
 0.919
C1N0X2_MICPC
Type II secretory pathway family protein.
    
 
 0.904
C1N2P1_MICPC
Predicted protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.835
C1MRV4_MICPC
Predicted protein; Belongs to the universal ribosomal protein uL23 family.
    
 0.833
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.