Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C1MH25_MICPC | C1MWY7_MICPC | C1MH25 | C1MWY7 | Predicted protein. | Predicted protein. | 0.602 |
C1MJ78_MICPC | C1MWY7_MICPC | C1MJ78 | C1MWY7 | Predicted protein. | Predicted protein. | 0.649 |
C1MJ78_MICPC | C1N3J8_MICPC | C1MJ78 | C1N3J8 | Predicted protein. | Glutamyl-tRNA amidotransferase. | 0.423 |
C1MM37_MICPC | C1MWY7_MICPC | C1MM37 | C1MWY7 | Predicted protein. | Predicted protein. | 0.551 |
C1MM37_MICPC | C1N157_MICPC | C1MM37 | C1N157 | Predicted protein. | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis. | 0.795 |
C1MM37_MICPC | C1N1Y5_MICPC | C1MM37 | C1N1Y5 | Predicted protein. | TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.795 |
C1MM37_MICPC | C1N3J8_MICPC | C1MM37 | C1N3J8 | Predicted protein. | Glutamyl-tRNA amidotransferase. | 0.405 |
C1MMS3_MICPC | C1MWY7_MICPC | C1MMS3 | C1MWY7 | Predicted protein. | Predicted protein. | 0.602 |
C1MS43_MICPC | C1MWY7_MICPC | C1MS43 | C1MWY7 | Predicted protein. | Predicted protein. | 0.551 |
C1MS43_MICPC | C1N157_MICPC | C1MS43 | C1N157 | Predicted protein. | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis. | 0.795 |
C1MS43_MICPC | C1N1Y5_MICPC | C1MS43 | C1N1Y5 | Predicted protein. | TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.795 |
C1MS43_MICPC | C1N3J8_MICPC | C1MS43 | C1N3J8 | Predicted protein. | Glutamyl-tRNA amidotransferase. | 0.405 |
C1MU17_MICPC | C1MWY7_MICPC | C1MU17 | C1MWY7 | Predicted protein. | Predicted protein. | 0.610 |
C1MU17_MICPC | C1N157_MICPC | C1MU17 | C1N157 | Predicted protein. | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis. | 0.821 |
C1MU17_MICPC | C1N1Y5_MICPC | C1MU17 | C1N1Y5 | Predicted protein. | TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.900 |
C1MU17_MICPC | C1N3J8_MICPC | C1MU17 | C1N3J8 | Predicted protein. | Glutamyl-tRNA amidotransferase. | 0.405 |
C1MWY7_MICPC | C1MH25_MICPC | C1MWY7 | C1MH25 | Predicted protein. | Predicted protein. | 0.602 |
C1MWY7_MICPC | C1MJ78_MICPC | C1MWY7 | C1MJ78 | Predicted protein. | Predicted protein. | 0.649 |
C1MWY7_MICPC | C1MM37_MICPC | C1MWY7 | C1MM37 | Predicted protein. | Predicted protein. | 0.551 |
C1MWY7_MICPC | C1MMS3_MICPC | C1MWY7 | C1MMS3 | Predicted protein. | Predicted protein. | 0.602 |
page 1 of 3