STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1MZF4_MICPCPredicted protein. (883 aa)    
Predicted Functional Partners:
C1MT68_MICPC
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.999
C1MTJ2_MICPC
mRNA_cap_enzyme.
    
 0.981
C1MLU3_MICPC
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.976
C1MSK8_MICPC
Predicted protein.
    
   0.949
C1N3A1_MICPC
Predicted protein.
    
   0.949
C1MIY0_MICPC
Predicted protein.
   
 0.923
PF16
Central pair protein.
   
 0.923
C1N5E9_MICPC
Predicted protein.
   
 
 0.918
C1MHX8_MICPC
Predicted protein.
   
 0.884
Nsp1
Structural constituent of nuclear pore, nucleoporin 62.
   
 0.857
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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