STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1MZP6_MICPCSet domain protein. (520 aa)    
Predicted Functional Partners:
C1MGG8_MICPC
ARID/BRIGHT DNA binding domain protein.
    
 0.989
C1MUM2_MICPC
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.549
C1MHL2_MICPC
Histone H2B; Belongs to the histone H2B family.
    
  0.536
C1MKF7_MICPC
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.536
C1MW44_MICPC
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.536
C1ML80_MICPC
Histone H3.
    
 0.525
C1MPE5_MICPC
Histone H3; Belongs to the histone H3 family.
    
 0.525
C1MUM3_MICPC
Histone H3; Belongs to the histone H3 family.
    
 0.525
C1MYG5_MICPC
Predicted protein.
    
 0.471
C1N1Z3_MICPC
SNF2 super family.
    
 0.471
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.