STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBSSIStarch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. (582 aa)    
Predicted Functional Partners:
DPE1
4-alpha-glucanotransferase.
  
 
 0.967
SBEI
Glycoside hydrolase family 13 protein.
  
 
 0.967
ADG2A
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
  
  
 0.959
ADG2B
Glucose-1-phosphate adenylyltransferase chloroplast.
  
  
 0.959
ADG1
Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.
  
  
 0.958
SBEIIA
Glycoside hydrolase family 13 protein.
  
 
 0.958
SBEIIB
Glycoside hydrolase family 13 protein.
  
 
 0.956
SSIIIA
Glycosyltransferase family 5 protein.
 
 
0.956
DPE2
Glycoside hydrolase family 77 protein.
  
 
 0.956
SSIIIC
Soluble starch synthase.
 
 
0.956
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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