STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1N351_MICPCPredicted protein. (276 aa)    
Predicted Functional Partners:
C1MRX6_MICPC
Predicted protein.
  
  
 0.755
PGM
Phosphoglucomutase/phosphomannomutase family protein.
    
  0.632
C1N5X8_MICPC
Predicted protein.
    
  0.632
C1MWW1_MICPC
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
  
 0.564
C1MWD1_MICPC
Predicted protein.
  
  
 0.561
C1N3J8_MICPC
Glutamyl-tRNA amidotransferase.
  
 
 0.546
C1MXV2_MICPC
Predicted protein.
   
  
 0.522
C1N6R3_MICPC
Predicted protein.
  
   0.521
C1N6X2_MICPC
Predicted protein.
  
   0.521
C1N312_MICPC
Predicted protein.
   
  
 0.512
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.