STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1N449_MICPCPredicted protein. (292 aa)    
Predicted Functional Partners:
C1MSI1_MICPC
Predicted protein.
   
 
 0.997
C1MHS1_MICPC
Predicted protein.
   
 
 0.993
C1MKP7_MICPC
Predicted protein.
   
 
 0.992
C1MP84_MICPC
Predicted protein.
   
 
 0.990
C1ML31_MICPC
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.989
C1N4Z8_MICPC
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 
 0.987
C1MML1_MICPC
Predicted protein.
   
 
 0.985
C1N4M8_MICPC
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.985
C1MZ25_MICPC
Predicted protein.
   
 
 0.975
C1N066_MICPC
Predicted protein.
   
    0.974
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.