STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1N451_MICPCATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (491 aa)    
Predicted Functional Partners:
C1MHR2_MICPC
Predicted protein.
  
 0.850
C1MZC7_MICPC
Predicted protein; Belongs to the PI3/PI4-kinase family.
   
 0.782
MRE11
Mre11 DNA repair/recombination protein.
  
 0.780
Mus81
Ercc4-like protein.
   
 0.753
Mlh1
DNA mismatch repair and recombination.
  
 0.710
C1MI09_MICPC
Predicted protein.
   
 0.682
C1N7J7_MICPC
Predicted protein.
   
 0.682
C1MR96_MICPC
Dead-box like helicase with PHD domain.
   
 
 0.681
C1N9D3_MICPC
Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.
   
 0.680
C1MPH3_MICPC
Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses.
    
 0.677
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.