STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1N5E3_MICPCAlkyl transferase; Belongs to the UPP synthase family. (222 aa)    
Predicted Functional Partners:
C1N3K0_MICPC
Predicted protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.961
GGPS1
Geranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.947
C1MMX3_MICPC
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.932
C1N9Y3_MICPC
Predicted protein.
     
 0.932
C1MJN2_MICPC
Predicted protein.
   
 0.924
PSY1
Phytoene synthase.
   
 
 0.817
C1MQ14_MICPC
Predicted protein.
   
 
 0.817
PSY2
Phytoene synthase.
   
 
 0.817
IPI
Isopentenyl-diphosphate delta-isomerase I.
  
 
 0.727
C1N667_MICPC
Predicted protein.
  
 
 0.682
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
Server load: low (26%) [HD]