STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1N5W3_MICPCPredicted protein. (324 aa)    
Predicted Functional Partners:
C1MIB8_MICPC
Predicted protein.
     
 0.952
C1MSF5_MICPC
Predicted protein.
    
  0.952
C1N743_MICPC
Predicted protein.
     
 0.945
C1MTW5_MICPC
Predicted protein.
   
 
 0.935
C1MU87_MICPC
Predicted protein.
   
 0.920
C1MHM8_MICPC
Predicted protein.
   
 0.848
C1MJV0_MICPC
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.848
C1MN82_MICPC
Predicted protein.
   
 0.848
C1MNX8_MICPC
Predicted protein.
   
 0.848
C1MRY1_MICPC
Predicted protein.
   
 0.848
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.