STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1N757_MICPCNuclear cap-binding protein subunit 2. (147 aa)    
Predicted Functional Partners:
C1MUB0_MICPC
Predicted protein.
   
 0.994
C1MYS1_MICPC
Predicted protein.
    
 0.992
RRM
RNA binding protein.
   
0.990
C1MLB9_MICPC
SLBP_RNA_bind domain-containing protein.
   
 
 0.989
C1MNP4_MICPC
Predicted protein.
   
  0.988
C1MYJ8_MICPC
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
     
 0.988
C1MU87_MICPC
Predicted protein.
    
 0.985
C1N7A0_MICPC
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.985
C1MVZ5_MICPC
Predicted protein.
   
 
 0.983
C1MIS8_MICPC
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
   
 0.982
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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