STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1N8R6_MICPCSet domain protein. (284 aa)    
Predicted Functional Partners:
C1ML80_MICPC
Histone H3.
   
 0.631
C1MPE5_MICPC
Histone H3; Belongs to the histone H3 family.
   
 0.631
C1MUM3_MICPC
Histone H3; Belongs to the histone H3 family.
   
 0.631
C1MUM2_MICPC
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.591
C1MWU9_MICPC
Predicted protein.
   
 0.588
C1N7T3_MICPC
Polycomb group protein.
    
 0.584
C1MSH9_MICPC
Predicted protein.
    
  0.567
C1N2W9_MICPC
Predicted protein.
   
  0.525
C1MX93_MICPC
COMPASS/Set1C complex protein.
    
 0.523
C1MQ36_MICPC
Predicted protein.
    
 0.519
Your Current Organism:
Micromonas pusilla
NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.