C1N960_MICPC protein (Micromonas pusilla) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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Score

C1N960_MICPC

Predicted protein. (669 aa)

Predicted Functional Partners:

C1MSP2_MICPC

0.737

C1ML82_MICPC

0.715

snRNP

0.701

U1snRNPC

0.635

C1N675_MICPC

0.621

C1N7A0_MICPC

0.595

C1MMV4_MICPC

0.591

C1MP15_MICPC

0.584

C1MNH6_MICPC

0.581

C1MPZ8_MICPC

0.571

Your Current Organism:

Micromonas pusilla

NCBI taxonomy Id: 564608
Other names: M. pusilla CCMP1545, Micromonas pusilla CCMP1545

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1ML82_MICPC	C1MMV4_MICPC	C1ML82	C1MMV4	Predicted protein.	Predicted protein.	0.976
C1ML82_MICPC	C1MNH6_MICPC	C1ML82	C1MNH6	Predicted protein.	Predicted protein.	0.636
C1ML82_MICPC	C1MPZ8_MICPC	C1ML82	C1MPZ8	Predicted protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.966
C1ML82_MICPC	C1N675_MICPC	C1ML82	C1N675	Predicted protein.	Predicted protein.	0.961
C1ML82_MICPC	C1N7A0_MICPC	C1ML82	C1N7A0	Predicted protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.963
C1ML82_MICPC	C1N960_MICPC	C1ML82	C1N960	Predicted protein.	Predicted protein.	0.715
C1ML82_MICPC	snRNP	C1ML82	C1MMA5	Predicted protein.	U1 small nuclear ribonucleoprotein.	0.647
C1MMV4_MICPC	C1ML82_MICPC	C1MMV4	C1ML82	Predicted protein.	Predicted protein.	0.976
C1MMV4_MICPC	C1MNH6_MICPC	C1MMV4	C1MNH6	Predicted protein.	Predicted protein.	0.987
C1MMV4_MICPC	C1MPZ8_MICPC	C1MMV4	C1MPZ8	Predicted protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.987
C1MMV4_MICPC	C1MSP2_MICPC	C1MMV4	C1MSP2	Predicted protein.	Predicted protein.	0.530
C1MMV4_MICPC	C1N675_MICPC	C1MMV4	C1N675	Predicted protein.	Predicted protein.	0.978
C1MMV4_MICPC	C1N7A0_MICPC	C1MMV4	C1N7A0	Predicted protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.981
C1MMV4_MICPC	C1N960_MICPC	C1MMV4	C1N960	Predicted protein.	Predicted protein.	0.591
C1MMV4_MICPC	U1snRNPC	C1MMV4	C1MKH9	Predicted protein.	U1 small nuclear ribonucleoprotein C protein.	0.951
C1MMV4_MICPC	snRNP	C1MMV4	C1MMA5	Predicted protein.	U1 small nuclear ribonucleoprotein.	0.933
C1MNH6_MICPC	C1ML82_MICPC	C1MNH6	C1ML82	Predicted protein.	Predicted protein.	0.636
C1MNH6_MICPC	C1MMV4_MICPC	C1MNH6	C1MMV4	Predicted protein.	Predicted protein.	0.987
C1MNH6_MICPC	C1MPZ8_MICPC	C1MNH6	C1MPZ8	Predicted protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.986
C1MNH6_MICPC	C1MSP2_MICPC	C1MNH6	C1MSP2	Predicted protein.	Predicted protein.	0.913