STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EU48Transcription initiation factor TFIID subunit 6. (421 aa)    
Predicted Functional Partners:
A0A1Y2F1K9
DUF3591 domain-containing protein.
    
 0.999
A0A1Y2F5B4
TAFII55 protein conserved region-domain-containing protein.
    
 0.999
A0A1Y2F8F3
Transcription initiation factor TFIID 23-30kDa subunit-domain-containing protein.
    
 0.999
A0A1Y2FA62
Uncharacterized protein.
    
 0.999
A0A1Y2FAU8
Transcription factor TFIID-domain-containing protein.
   
 0.999
A0A1Y2FB01
TAF8_C domain-containing protein.
    
 0.999
A0A1Y2FCZ8
Transcription initiation factor IID, 31kD subunit-domain-containing protein.
   
 0.999
A0A1Y2FES3
Transcription factor TFIID complex subunit Taf5.
   
 0.999
A0A1Y2FQ40
TAFII28-like protein.
    
 0.999
A0A1Y2FEV1
Histone acetyltransferases subunit 3-domain-containing protein.
   
 0.988
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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