STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EV51Uncharacterized protein. (138 aa)    
Predicted Functional Partners:
A0A1Y2FH22
Polyubiquitin 10.
   
 
 0.901
A0A1Y2F970
XPC-binding domain-domain-containing protein.
   
 
 0.832
A0A1Y2FLL6
Ribosomal protein S27a-domain-containing protein.
   
 
 0.688
A0A1Y2FQ54
Complex I intermediate-associated protein 30-domain-containing protein.
   
 
 0.688
A0A1Y2FQ99
NADH:ubiquinone oxidoreductase intermediate-associated protein 30.
   
 
 0.688
A0A1Y2FFL3
VWFA domain-containing protein.
   
 
 0.682
A0A1Y2FVX5
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
   
 
 0.672
A0A1Y2FAS7
Uncharacterized protein.
   
 
 0.653
A0A1Y2FR84
Uncharacterized protein.
   
 
 0.653
A0A1Y2F2W3
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 
 0.624
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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