STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EV57Aldo/keto reductase. (350 aa)    
Predicted Functional Partners:
A0A1Y2F1E6
Tryptophan synthase.
     
 0.838
A0A1Y2ESQ6
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.712
A0A1Y2ESR8
Uncharacterized protein.
    
 0.712
A0A1Y2F5D8
Non-repetitive/WGA-negative nucleoporin C-terminal-domain-containing protein.
   
 0.707
A0A1Y2EV15
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.700
A0A1Y2EV44
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.694
A0A1Y2EW80
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.645
A0A1Y2FIC2
Putative nucleoporin; Belongs to the WD repeat SEC13 family.
    
 0.637
A0A1Y2F059
Nucleoporin autopeptidase-domain-containing protein.
    
 0.633
A0A1Y2F0B4
Uncharacterized protein.
    
 0.633
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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