STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EVX8Ubiquitin-conjugating enzyme E2-binding protein. (359 aa)    
Predicted Functional Partners:
A0A1Y2FNB4
DWNN domain-domain-containing protein.
    
 0.972
A0A1Y2FTT3
Beta-lactamase-like protein.
    
 
 0.747
A0A1Y2FR06
Ubiquitin conjugating enzyme E2-C, Ubc11; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.544
A0A1Y2FAK6
Uncharacterized protein.
      
 0.499
A0A1Y2FUX1
Cleavage and polyadenylation specificity factor subunit 2.
    
 
 0.494
A0A1Y2FD73
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
      
 0.489
A0A1Y2FDS5
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
      
 0.465
A0A1Y2FQ28
Beta-lactamase-like protein.
    
 
 0.415
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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