STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EW95Vacuolar import and degradation protein. (196 aa)    
Predicted Functional Partners:
A0A1Y2EZB7
Concanavalin A-like lectin/glucanase domain-containing protein.
    
 
 0.961
A0A1Y2FCN9
CTLH/CRA C-terminal to lish motif domain-domain-containing protein.
    
 
 0.952
A0A1Y2FQI6
Concanavalin A-like lectin/glucanase domain-containing protein.
    
 
 0.910
A0A1Y2F802
CTLH/CRA C-terminal to lish motif domain-domain-containing protein.
    
 
 0.781
A0A1Y2FKI7
Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; Belongs to the FBPase class 1 family.
    
 
 0.778
A0A1Y2F7Q1
WD40-repeat-containing domain protein.
    
 
 0.760
A0A1Y2EX86
Mago nashi protein.
 
      0.754
A0A1Y2FQZ1
LisH domain-containing protein.
    
 
 0.647
A0A1Y2FUM3
CTLH/CRA C-terminal to lish motif domain-domain-containing protein.
    
 
 0.647
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
 
      0.502
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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