STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2EWQ9Uncharacterized protein. (75 aa)    
Predicted Functional Partners:
A0A1Y2F6I3
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.842
A0A1Y2FM81
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.748
A0A1Y2FR57
cAMP-dependent protein kinase regulatory subunit.
    
 0.712
A0A1Y2FIS4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.674
A0A1Y2F742
Uncharacterized protein.
    
 0.672
A0A1Y2EUJ3
RNA polymerase III transcription factor IIIC subunit-domain-containing protein.
    
 0.670
A0A1Y2EQM5
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.668
A0A1Y2FAU8
Transcription factor TFIID-domain-containing protein.
    
 0.668
A0A1Y2FF90
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.666
A0A1Y2EU48
Transcription initiation factor TFIID subunit 6.
    
 0.663
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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