STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F079Up-regulated during septation-domain-containing protein. (862 aa)    
Predicted Functional Partners:
A0A1Y2FLN8
ANK_REP_REGION domain-containing protein.
   
 0.674
A0A1Y2F6R3
WSC domain-domain-containing protein.
    
 0.585
A0A1Y2FQH6
Uncharacterized protein.
    
 0.585
A0A1Y2FMF6
Integral peroxisomal membrane peroxin-domain-containing protein.
    
 0.571
A0A1Y2EPY8
Uncharacterized protein.
    
 0.567
A0A1Y2FVX5
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
    
  0.564
A0A1Y2F742
Uncharacterized protein.
    
 0.563
A0A1Y2EUJ3
RNA polymerase III transcription factor IIIC subunit-domain-containing protein.
    
 0.560
A0A1Y2FGN9
Ubiquitin-conjugating enzyme 9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.556
A0A1Y2FH22
Polyubiquitin 10.
    
 0.555
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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