STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F0E3Ribosomal protein S7 domain-containing protein. (139 aa)    
Predicted Functional Partners:
A0A1Y2F1B0
Elongation factor 3, variant 1.
  
 
 0.999
A0A1Y2F1F8
Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
  
 0.999
A0A1Y2F1N2
Uncharacterized protein.
  
 0.999
A0A1Y2F7T6
30S ribosomal protein S16.
   
 0.999
A0A1Y2FER5
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.999
A0A1Y2FH59
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
 0.999
A0A1Y2FSQ1
Ribosomal protein S5, C-terminal domain-domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
A0A1Y2FUP4
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
A0A1Y2FUL3
Nucleoside diphosphate kinase.
  
 0.998
A0A1Y2F7T5
Ribosomal protein S10 domain-containing protein.
  
 0.995
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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