STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F1F4Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex. (234 aa)    
Predicted Functional Partners:
A0A1Y2FDG0
t-SNARE coiled-coil homology domain-containing protein.
   
 0.982
A0A1Y2FDP4
Uncharacterized protein.
   
 0.975
A0A1Y2FLX9
Snare Ykt6; Belongs to the synaptobrevin family.
   
 0.970
A0A1Y2FFE7
t-SNARE.
   
 0.968
A0A1Y2FNC4
Longin-like domain-containing protein; Belongs to the synaptobrevin family.
    
 0.968
A0A1Y2FM14
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.965
A0A1Y2F272
P115 like vesicle tethering protein.
    
 0.964
A0A1Y2ES34
Uncharacterized protein.
   
 0.902
A0A1Y2F1W0
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
      0.853
A0A1Y2F7S6
Soluble NSF attachment protein.
    
 0.839
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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