STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F1G7Spindle pole body component. (809 aa)    
Predicted Functional Partners:
A0A1Y2FSQ8
Spindle pole body component.
   
0.994
A0A1Y2EXP0
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.993
A0A1Y2FU46
Spindle pole body component.
   
 0.982
A0A1Y2F6S3
DASH complex subunit Ask1-domain-containing protein.
   
 0.922
A0A1Y2F1F6
Cnn_1N domain-containing protein.
    
 
 0.773
A0A1Y2FDE1
SPT2 chromatin protein-domain-containing protein.
    
 
 0.773
A0A1Y2FUL3
Nucleoside diphosphate kinase.
    
  0.718
A0A1Y2EWZ0
Uncharacterized protein.
    
 0.673
A0A1Y2EZI4
Peroxin/Ferlin domain-containing protein.
    
 0.673
A0A1Y2FAA2
Uncharacterized protein.
    
 0.673
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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