STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F4P9Uncharacterized protein. (1098 aa)    
Predicted Functional Partners:
A0A1Y2FSC9
Histone H3; Belongs to the histone H3 family.
   
 0.997
A0A1Y2FND3
Histone H3v.
   
 0.959
A0A1Y2FE91
Piwi domain-domain-containing protein; Belongs to the argonaute family.
    
 
 0.952
A0A1Y2FIS4
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.929
A0A1Y2EQW6
Histone H2A; Belongs to the histone H2A family.
   
 0.794
A0A1Y2F586
2OG-FeII_Oxy_2 domain-containing protein.
    
 0.787
A0A1Y2FF24
SET domain-containing protein.
    
 0.780
A0A1Y2FN87
SET domain-containing protein.
    
 0.780
A0A1Y2FQS7
CrcB-like protein-domain-containing protein.
    
 0.780
A0A1Y2FCD6
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.740
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.