STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2F742Uncharacterized protein. (887 aa)    
Predicted Functional Partners:
A0A1Y2EUJ3
RNA polymerase III transcription factor IIIC subunit-domain-containing protein.
   
 0.999
A0A1Y2FKB8
Brf1-like TBP-binding domain-domain-containing protein.
    
 0.989
A0A1Y2F5F3
RNA polymerase III RPC4-domain-containing protein.
    
 0.975
A0A1Y2FUX1
Cleavage and polyadenylation specificity factor subunit 2.
    
   0.948
A0A1Y2F9M6
CPSF A subunit region-domain-containing protein.
    
   0.947
A0A1Y2FXC1
Uncharacterized protein.
    
 0.943
A0A1Y2F7X9
SANT domain-containing protein.
   
 0.932
A0A1Y2FTT3
Beta-lactamase-like protein.
   
   0.923
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
    
 
 0.922
A0A1Y2FD92
DUF3453 domain-containing protein.
   
   0.921
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
Server load: low (12%) [HD]